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Super-enhancer overview

SE ID: SE_02_060200158
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr19:40715872-40735613
Size: 19741
Super-enhancer rank 158
Number of SE elements: 2
ChIP density(Case|Control): 41730.4999|4737.84
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITPKC;
ROSE Overlap ITPKC; ADCK4;
ROSE Proximal MIA; MIA-RAB4B; ADCK4; C19orf54; SNRPA; RAB4B-EGLN2; NUMBL;
ROSE Closest ITPKC;
Lasso ADCK4; MIA; NUMBL; SNRPA; RAB4B; ITPKC; EGLN2; C19orf54;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200158 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers