SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200103
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr15:83279629-83324227
Size: 44598
Super-enhancer rank 103
Number of SE elements: 8
ChIP density(Case|Control): 53606.796|6654.0216
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BNC1 ;
ROSE Overlap BNC1 ;
ROSE Proximal ;
ROSE Closest BNC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HDGFRP3 ; BNC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200103 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers