SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_060200097
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr13:33207881-33286663
Size: 78782
Super-enhancer rank 97
Number of SE elements: 17
ChIP density(Case|Control): 62442.6132|13195.985
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: STARD13-AS ;
ROSE Overlap STARD13 ; STARD13-AS ;
ROSE Proximal STARD13 ;
ROSE Closest STARD13-AS ;
Lasso ;
PreSTIGE ;
ABC ;
BETA STARD13 ; STARD13-AS ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200097 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers