SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200081
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr2:84888632-84973295
Size: 84663
Super-enhancer rank 81
Number of SE elements: 16
ChIP density(Case|Control): 65469.8979|12470.8599
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMSB10 ;
ROSE Overlap TMSB10 ; KCMF1 ;
ROSE Proximal TRABD2A ;
ROSE Closest TMSB10 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMSB10 ; TRABD2A ; KCMF1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200081 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers