SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_060200077
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr3:30281509-30358964
Size: 77455
Super-enhancer rank 77
Number of SE elements: 21
ChIP density(Case|Control): 61754.8715|8233.4665
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TGFBR2 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest TGFBR2 ;
Lasso ;
PreSTIGE ;
ABC TGFBR2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200077 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers