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Super-enhancer overview

SE ID: SE_02_060200067
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr12:52491410-52526083
Size: 34673
Super-enhancer rank 67
Number of SE elements: 6
ChIP density(Case|Control): 63038.9813|6213.4016
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRT5 ;
ROSE Overlap KRT5 ; KRT6A ;
ROSE Proximal KRT74 ; KRT6C ; KRT71 ; KRT6B ;
ROSE Closest KRT5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KRT6A ; KRT72 ; KRT71 ; KRT6C ; KRT75 ; KRT6B ; KRT74 ; KRT5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200067 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers