SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200061
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr6:35724168-35734401
Size: 10233
Super-enhancer rank 61
Number of SE elements: 1
ChIP density(Case|Control): 60730.8084|3223.395
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FKBP5 ;
ROSE Overlap LOC285847 ; FKBP5 ;
ROSE Proximal CLPSL2 ; FKBP5 ; ARMC12 ; CLPSL1 ;
ROSE Closest FKBP5 ;
Lasso CLPSL1 ; FKBP5 ; ARMC12 ;
PreSTIGE ;
ABC ;
BETA MIR5690 ; CLPSL2 ; CLPS ; FKBP5 ; ARMC12 ; LOC285847 ; LHFPL5 ; CLPSL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200061 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers