SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200059
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr1:209808331-209846469
Size: 38138
Super-enhancer rank 59
Number of SE elements: 6
ChIP density(Case|Control): 67897.0814|10068.432
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DIEXF ;
ROSE Overlap DIEXF ;
ROSE Proximal C1orf74 ; TRAF3IP3 ; IRF6 ;
ROSE Closest DIEXF ;
Lasso ;
PreSTIGE ;
ABC CAMK1G ; LAMB3 ; G0S2 ; HSD11B1 ; LOC101930114 ; TRAF3IP3 ;
BETA TRAF3IP3 ; IRF6 ; C1orf74 ; DIEXF ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200059 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers