SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200044
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr10:103849743-103918214
Size: 68471
Super-enhancer rank 44
Number of SE elements: 14
ChIP density(Case|Control): 75372.8768|10291.1913
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH3PXD2A ;
ROSE Overlap SH3PXD2A ; OBFC1 ;
ROSE Proximal SLK ;
ROSE Closest SH3PXD2A ;
Lasso ;
PreSTIGE ;
ABC NOLC1 ; PPRC1 ; LDB1 ;
BETA SLK ; OBFC1 ; SH3PXD2A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200044 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers