SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200033
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr1:209643529-209674051
Size: 30522
Super-enhancer rank 33
Number of SE elements: 8
ChIP density(Case|Control): 81161.0502|10643.0214
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LAMB3 ;
ROSE Overlap LAMB3 ;
ROSE Proximal HSD11B1 ; MIR4260 ; G0S2 ;
ROSE Closest LAMB3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LAMB3 ; TRAF3IP3 ; MIR4260 ; G0S2 ; HSD11B1 ; CAMK1G ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200033 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers