SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_060200018
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr12:124904465-124941314
Size: 36849
Super-enhancer rank 18
Number of SE elements: 10
ChIP density(Case|Control): 88061.7402|6798.6405
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5188;
ROSE Overlap MIR5188; UBC;
ROSE Proximal SCARB1; DHX37;
ROSE Closest MIR5188;
Lasso SCARB1; BRI3BP;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200018 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers