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Super-enhancer overview

SE ID: SE_02_060000037
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p53shRNA_DMSO
Genomic region: chr11:65471665-65508308
Size: 36643
Super-enhancer rank 37
Number of SE elements: 13
ChIP density(Case|Control): 83370.1536|7841.602
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MALAT1;
ROSE Overlap MALAT1;
ROSE Proximal SCYL1; LTBP3; NEAT1; MIR612;
ROSE Closest MALAT1;
Lasso SLC25A45; EHBP1L1; LTBP3; CAPN1; RELA; DPF2; SSSCA1; SIPA1; CDC42EP2; SCYL1; FRMD8; PCNXL3; KCNK7; AP5B1; FAM89B;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060000037 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers