SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_058900633
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Cervix
Biosample name: HeLa Kyoto_Luci siRNA
Genomic region: chr16:4277049-4307524
Size: 30475
Super-enhancer rank 633
Number of SE elements: 9
ChIP density(Case|Control): 12104.67|1663.935
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TFAP4 ;
ROSE Overlap ;
ROSE Proximal SRL ; GLIS2-AS1 ; TFAP4 ; PAM16 ; LINC01569 ; GLIS2 ;
ROSE Closest TFAP4 ;
Lasso ;
PreSTIGE TFAP4 ;
ABC ;
BETA PAM16 ; GLIS2 ; LINC01569 ; SRL ; GLIS2-AS1 ; TFAP4 ; VASN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_058900633 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers