SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_058900489
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Cervix
Biosample name: HeLa Kyoto_Luci siRNA
Genomic region: chr22:46064719-46069951
Size: 5232
Super-enhancer rank 489
Number of SE elements: 1
ChIP density(Case|Control): 12292.0608|275.7264
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRR34 ;
ROSE Overlap ;
ROSE Proximal PRR34 ; MIR3619 ; LINC00899 ; PRR34-AS1 ; MIRLET7BHG ; MIRLET7A3 ; MIR4763 ; MIRLET7B ;
ROSE Closest PRR34 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PPARA ; MIRLET7B ; MIRLET7BHG ; PRR34 ; LINC00899 ; PRR34-AS1 ; MIR4763 ; WNT7B ; MIR3619 ; LOC730668 ; MIRLET7A3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_058900489 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers