SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_058900487
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Cervix
Biosample name: HeLa Kyoto_Luci siRNA
Genomic region: chr3:189860966-189864572
Size: 3606
Super-enhancer rank 487
Number of SE elements: 2
ChIP density(Case|Control): 12480.7266|461.9286
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR944 ;
ROSE Overlap TP63 ;
ROSE Proximal MIR944 ;
ROSE Closest MIR944 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TP63 ; MIR944 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_058900487 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers