SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_058900005
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Cervix
Biosample name: HeLa Kyoto_Luci siRNA
Genomic region: chr17:59781876-59859842
Size: 77966
Super-enhancer rank 5
Number of SE elements: 32
ChIP density(Case|Control): 64555.848|5668.1282
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR21 ;
ROSE Overlap TUBD1 ; MIR21 ; VMP1 ;
ROSE Proximal RPS6KB1 ; TUBD1 ;
ROSE Closest MIR21 ;
Lasso ;
PreSTIGE PTRH2 ; TUBD1 ; VMP1 ;
ABC ;
BETA TUBD1 ; RPS6KB1 ; MIR21 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_058900005 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers