SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_058600180
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Chordal
Biosample name: patient-derived chordoma MGH_4
Genomic region: chr3:187735362-187751245
Size: 15883
Super-enhancer rank 180
Number of SE elements: 1
ChIP density(Case|Control): 38946.7043|2768.4069
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BCL6;
ROSE Overlap BCL6;
ROSE Proximal RTP2; LOC100131635; BCL6;
ROSE Closest BCL6;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_058600180 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers