SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_058400657
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Lung
Biosample name: H1299 WT
Genomic region: chr3:46926113-46980590
Size: 54477
Super-enhancer rank 657
Number of SE elements: 12
ChIP density(Case|Control): 16566.4557|4025.8503
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC12;
ROSE Overlap CCDC12; NBEAL2;
ROSE Proximal PTH1R; NRADDP;
ROSE Closest CCDC12;
Lasso CCDC12; PTH1R; MYL3;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_058400657 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers