SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_056900434
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Periodontal ligament
Biosample name: mesenchymal stem cell
Genomic region: chr3:58381705-58436465
Size: 54760
Super-enhancer rank 434
Number of SE elements: 27
ChIP density(Case|Control): 21591.868|5908.604
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDHB;
ROSE Overlap PXK; PDHB;
ROSE Proximal PDHB; PXK;
ROSE Closest PDHB;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_056900434 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers