SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_056000229
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: iPSCs
Biosample name: FX52_Cas9-inactive Tet1_CGG sgRNA
Genomic region: chr1:26692328-26698154
Size: 5826
Super-enhancer rank 229
Number of SE elements: 3
ChIP density(Case|Control): 7558.6524|2413.7118
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARID1A;
ROSE Overlap ARID1A;
ROSE Proximal ;
ROSE Closest ARID1A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_056000229 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers