SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_055600233
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Induced pluripotent stem cell
Tissue type: iPSCs
Biosample name: BOFS hiPSC cl1
Genomic region: chr12:54256952-54263460
Size: 6508
Super-enhancer rank 233
Number of SE elements: 1
ChIP density(Case|Control): 26314.4472|1159.7256
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX5;
ROSE Overlap CBX5;
ROSE Proximal NFE2; MIR3198-2; HNRNPA1;
ROSE Closest CBX5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_055600233 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers