SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_055200016
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Other
Biosample name: SYO1 shCt
Genomic region: chr1:12423325-12487511
Size: 64186
Super-enhancer rank 16
Number of SE elements: 32
ChIP density(Case|Control): 63550.5586|17509.9408
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORA59A;
ROSE Overlap VPS13D;
ROSE Proximal SNORA59A;
ROSE Closest SNORA59A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_055200016 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers