SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_054501140
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr3:196496522-196529504
Size: 32982
Super-enhancer rank 1140
Number of SE elements: 5
ChIP density(Case|Control): 30795.2934|4231.5906
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMCO1;
ROSE Overlap RNF168; SMCO1;
ROSE Proximal FBXO45; WDR53;
ROSE Closest SMCO1;
Lasso TFRC; UBXN7; RNF168; FBXO45; WDR53; SMCO1;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054501140 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers