SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054501121
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr19:50725107-50772526
Size: 47419
Super-enhancer rank 1121
Number of SE elements: 10
ChIP density(Case|Control): 31979.3736|5125.9939
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPR32 ;
ROSE Overlap GPR32 ; CLEC11A ;
ROSE Proximal MGC45922 ; SNORD88C ; SNORD88B ; C19orf48 ; SHANK1 ; ACPT ; SNORD88A ;
ROSE Closest GPR32 ;
Lasso GPR32 ; SHANK1 ; C19orf48 ; KLK1 ; KLK15 ; SYT3 ; C19orf81 ;
PreSTIGE ;
ABC ;
BETA C19orf48 ; SNORD88C ; KLK15 ; CLEC11A ; KLK1 ; GPR32 ; MGC45922 ; ACPT ; SHANK1 ; SNORD88B ; C19orf81 ; SNORD88A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054501121 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers