SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054501013
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr6:43165235-43190455
Size: 25220
Super-enhancer rank 1013
Number of SE elements: 5
ChIP density(Case|Control): 32611.982|3550.976
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CUL9 ;
ROSE Overlap SRF ; CUL9 ;
ROSE Proximal DNPH1 ;
ROSE Closest CUL9 ;
Lasso CUL7 ; DNPH1 ; RRP36 ; PEX6 ; KLHDC3 ; CNPY3 ; KLC4 ;
PreSTIGE ;
ABC ;
BETA CUL9 ; TTBK1 ; DNPH1 ; SRF ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054501013 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers