SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054501012
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr11:57423727-57433996
Size: 10269
Super-enhancer rank 1012
Number of SE elements: 3
ChIP density(Case|Control): 30455.8002|1392.4764
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC43A3 ;
ROSE Overlap SLC43A3 ;
ROSE Proximal PRG2 ; RTN4RL2 ; PRG3 ;
ROSE Closest SLC43A3 ;
Lasso SLC43A1 ; PRG2 ; SSRP1 ; UBE2L6 ; PRG3 ; TIMM10 ; SLC43A3 ; TNKS1BP1 ; RTN4RL2 ;
PreSTIGE ;
ABC CLP1 ;
BETA PRG2 ; PRG3 ; SLC43A3 ; SLC43A1 ; P2RX3 ; SSRP1 ; RTN4RL2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054501012 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers