SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054501002
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr12:56124380-56130598
Size: 6218
Super-enhancer rank 1002
Number of SE elements: 3
ChIP density(Case|Control): 30241.243|910.3152
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ESYT1 ;
ROSE Overlap ESYT1 ;
ROSE Proximal ERBB3 ; MYL6B ; MYL6 ; ZC3H10 ; RPL41 ; PA2G4 ;
ROSE Closest ESYT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SMARCC2 ; MYL6 ; ZC3H10 ; MYL6B ; ERBB3 ; PA2G4 ; RNF41 ; ESYT1 ; RPS26 ; RPL41 ; NABP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054501002 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers