SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_054500961
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr4:169603943-169628457
Size: 24514
Super-enhancer rank 961
Number of SE elements: 8
ChIP density(Case|Control): 33221.3728|3179.4658
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NEK1;
ROSE Overlap NEK1; CLCN3;
ROSE Proximal CLCN3;
ROSE Closest NEK1;
Lasso C4orf27;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500961 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers