SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054500928
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr3:13404118-13432450
Size: 28332
Super-enhancer rank 928
Number of SE elements: 5
ChIP density(Case|Control): 34766.1972|4218.6348
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NUP210 ;
ROSE Overlap NUP210 ;
ROSE Proximal HDAC11-AS1 ; HDAC11 ;
ROSE Closest NUP210 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HDAC11 ; HDAC11-AS1 ; NUP210 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500928 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers