SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_054500726
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr1:235324625-235332254
Size: 7629
Super-enhancer rank 726
Number of SE elements: 3
ChIP density(Case|Control): 36586.3953|1428.1488
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GGPS1 ;
ROSE Overlap GGPS1 ; ARID4B ;
ROSE Proximal ARID4B ; TBCE ;
ROSE Closest GGPS1 ;
Lasso ;
PreSTIGE ;
ABC RBM34 ;
BETA TBCE ; GGPS1 ; ARID4B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500726 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers