SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054500657
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr19:58580563-58606585
Size: 26022
Super-enhancer rank 657
Number of SE elements: 12
ChIP density(Case|Control): 41008.0698|3695.124
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CENPBD1P1 ;
ROSE Overlap CENPBD1P1 ;
ROSE Proximal UBE2M ; MZF1-AS1 ; TRIM28 ; MZF1 ; CHMP2A ; MIR6807 ;
ROSE Closest CENPBD1P1 ;
Lasso SLC27A5 ; ZNF324 ; ZNF446 ; MZF1 ; CHMP2A ; UBE2M ; TRIM28 ;
PreSTIGE ;
ABC ;
BETA TRIM28 ; SLC27A5 ; MZF1 ; CENPBD1P1 ; CHMP2A ; ZBTB45 ; MZF1-AS1 ; MIR6807 ; UBE2M ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500657 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers