SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_054500522
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chrX:49145071-49152374
Size: 7303
Super-enhancer rank 522
Number of SE elements: 1
ChIP density(Case|Control): 42843.7798|658.7306
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAGIX;
ROSE Overlap ;
ROSE Proximal PRICKLE3; WDR45; SYP-AS1; GPKOW; MAGIX; PLP2; SYP;
ROSE Closest MAGIX;
Lasso PRICKLE3; MAGIX; GPKOW; CCDC22; CACNA1F; SYP; PLP2; CCDC120; WDR45; AF196779.12;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500522 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers