SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054500516
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr6:143792449-143811982
Size: 19533
Super-enhancer rank 516
Number of SE elements: 5
ChIP density(Case|Control): 45656.4342|3029.5683
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LTV1 ;
ROSE Overlap PHACTR2 ;
ROSE Proximal LTV1 ;
ROSE Closest LTV1 ;
Lasso LTV1 ;
PreSTIGE ;
ABC ;
BETA ZC2HC1B ; LTV1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500516 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers