SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054500399
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr19:47225105-47231976
Size: 6871
Super-enhancer rank 399
Number of SE elements: 1
ChIP density(Case|Control): 48885.7908|903.5365
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3191 ;
ROSE Overlap MIR3190 ; BBC3 ; MIR3191 ;
ROSE Proximal INAFM1 ; CCDC9 ; BBC3 ;
ROSE Closest MIR3191 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SAE1 ; BBC3 ; INAFM1 ; MIR3190 ; C5AR1 ; MIR3191 ; CCDC9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500399 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers