SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054500330
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr3:128469290-128505055
Size: 35765
Super-enhancer rank 330
Number of SE elements: 4
ChIP density(Case|Control): 55192.548|2628.7275
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GATA2 ;
ROSE Overlap GATA2 ; GATA2-AS1 ; DNAJB8-AS1 ;
ROSE Proximal DNAJB8 ; LOC90246 ;
ROSE Closest GATA2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC90246 ; GATA2 ; DNAJB8-AS1 ; LINC01565 ; DNAJB8 ; GATA2-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500330 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers