SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054500044
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr10:5446607-5488609
Size: 42002
Super-enhancer rank 44
Number of SE elements: 9
ChIP density(Case|Control): 113749.8164|5527.4632
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NET1 ;
ROSE Overlap NET1 ;
ROSE Proximal CALML5 ; CALML3-AS1 ; CALML3 ; TUBAL3 ;
ROSE Closest NET1 ;
Lasso NET1 ; TUBAL3 ;
PreSTIGE NET1 ; TUBAL3 ;
ABC AKR1C8P ; TUBAL3 ; NET1 ;
BETA NET1 ; CALML5 ; TUBAL3 ; CALML3-AS1 ; CALML3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500044 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers