Super-enhancer overview
| SE ID: | SE_02_054500031 |
| Species: | Human |
| Data source: | NCBI GEO/SRA |
| Biosample type: | Cell line |
| Tissue type: | Bone marrow |
| Biosample name: | K562 WT |
| Genomic region: | chr3:14201600-14290434 |
| Size: | 88834 |
| Super-enhancer rank | 31 |
| Number of SE elements: | 27 |
| ChIP density(Case|Control): | 140268.886|12818.7462 |
| Genome browser: | 
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Super-enhancer annotation
eQTL
eRNA1~5
5~10
10~MAX
Super-enhancer associated genes
| Strategies/Algorithm | Gene name |
| The closest active: | LSM3 ; |
| ROSE Overlap | ; |
| ROSE Proximal | XPC ; LSM3 ; |
| ROSE Closest | LSM3 ; |
| Lasso | XPC ; LSM3 ; |
| PreSTIGE | ; |
| ABC | LSM3 ; XPC ; RBSN ; SH3BP5-AS1 ; CAPN7 ; COL6A4P1 ; LINC01267 ; TSEN2 ; TMEM40 ; CAND2 ; LINC02022 ; IQSEC1 ; NUP210 ; HDAC11-AS1 ; HDAC11 ; FBLN2 ; LINC00620 ; SLC6A6 ; CCDC174 ; HACL1 ; BTD ; NR2C2 ; TMEM43 ; FGD5-AS1 ; C3orf20 ; SH3BP5 ; METTL6 ; MRPS25 ; EAF1 ; CHCHD4 ; ANKRD28 ; COLQ ; |
| BETA | XPC ; LSM3 ; |