SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_054500013
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr5:90604245-90662308
Size: 58063
Super-enhancer rank 13
Number of SE elements: 6
ChIP density(Case|Control): 173323.8613|8848.8012
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ADGRV1 ;
ROSE Overlap ADGRV1 ;
ROSE Proximal ;
ROSE Closest ADGRV1 ;
Lasso POLR3G ; ARRDC3 ; CETN3 ; GPR98 ; LYSMD3 ; MBLAC2 ;
PreSTIGE ;
ABC LUCAT1 ;
BETA GPR98 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500013 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers