SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_054500010
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr11:65454568-65523013
Size: 68445
Super-enhancer rank 10
Number of SE elements: 14
ChIP density(Case|Control): 194404.3335|8815.716
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MALAT1;
ROSE Overlap MALAT1;
ROSE Proximal SCYL1; LTBP3; MIR612; SSSCA1; FAM89B; NEAT1; SSSCA1-AS1;
ROSE Closest MALAT1;
Lasso SCYL1; MAP3K11; EHBP1L1; SSSCA1; SIPA1; SPDYC; SLC25A45; LTBP3; DPF2; CDC42EP2; FRMD8; TIGD3; FAM89B;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500010 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers