SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_054500004
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562 WT
Genomic region: chr3:45040991-45146613
Size: 105622
Super-enhancer rank 4
Number of SE elements: 46
ChIP density(Case|Control): 231734.668|18346.5414
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDCP1;
ROSE Overlap CDCP1;
ROSE Proximal CLEC3B;
ROSE Closest CDCP1;
Lasso EXOSC7; ZDHHC3; CDCP1; TMEM158;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054500004 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers