SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_053900071
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: SK-N-BE_2_-C_GFP_control
Genomic region: chr1:149839063-149845967
Size: 6904
Super-enhancer rank 71
Number of SE elements: 1
ChIP density(Case|Control): 51489.3416|1055.6216
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST2H2AA4;
ROSE Overlap HIST2H2AA4; HIST2H3A;
ROSE Proximal HIST2H4B; HIST2H3D; HIST2H2AA3; HIST2H2BF; HIST2H3C; HIST2H2AB; HIST2H2BE; HIST2H2AC; HIST2H2BC;
ROSE Closest HIST2H2AA4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_053900071 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers