SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_053000534
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10A
Genomic region: chr3:14118417-14146182
Size: 27765
Super-enhancer rank 534
Number of SE elements: 13
ChIP density(Case|Control): 18288.8055|3562.2495
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM43;
ROSE Overlap TMEM43; CHCHD4; XPC;
ROSE Proximal XPC; LSM3; CHCHD4;
ROSE Closest TMEM43;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_053000534 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers