SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_052600338
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF7 TRPS1 KO
Genomic region: chr10:5544062-5555064
Size: 11002
Super-enhancer rank 338
Number of SE elements: 5
ChIP density(Case|Control): 25437.7242|1200.3182
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CALML3-AS1;
ROSE Overlap ;
ROSE Proximal CALML3; CALML5; CALML3-AS1;
ROSE Closest CALML3-AS1;
Lasso NET1; GDI2; CALML5;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_052600338 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers