SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_049401323
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Islets
Biosample name: differentiated hESCs Late pancreatic progenitor cells
Genomic region: chr1:154972199-154974495
Size: 2296
Super-enhancer rank 1323
Number of SE elements: 1
ChIP density(Case|Control): 6619.5976|346.4664
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SHC1 ;
ROSE Overlap SHC1 ;
ROSE Proximal PMVK ; CKS1B ; PBXIP1 ; SHC1 ; ZBTB7B ; PYGO2 ; LENEP ; MIR4258 ; FLAD1 ;
ROSE Closest SHC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ADAM15 ; FLAD1 ; SHC1 ; DCST1 ; LOC100505666 ; DCST2 ; CKS1B ; PYGO2 ; ZBTB7B ; PMVK ; MIR4258 ; EFNA4 ; LENEP ; PBXIP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_049401323 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers