SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_049401189
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Islets
Biosample name: differentiated hESCs Late pancreatic progenitor cells
Genomic region: chr12:48881497-48884977
Size: 3480
Super-enhancer rank 1189
Number of SE elements: 1
ChIP density(Case|Control): 7374.12|564.108
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RND1 ;
ROSE Overlap ;
ROSE Proximal DDX23 ; CCDC65 ; RND1 ; FKBP11 ;
ROSE Closest RND1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CACNB3 ; LOC100506125 ; CCDC65 ; RND1 ; ARF3 ; FKBP11 ; ADCY6 ; DDX23 ; WNT1 ; WNT10B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_049401189 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers