SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_049401160
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Islets
Biosample name: differentiated hESCs Late pancreatic progenitor cells
Genomic region: chr3:50195247-50211544
Size: 16297
Super-enhancer rank 1160
Number of SE elements: 5
ChIP density(Case|Control): 8945.4233|2055.0517
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC38A3 ;
ROSE Overlap SLC38A3 ; GNAT1 ;
ROSE Proximal SEMA3F ; GNAI2 ; MIR5787 ; MIR566 ;
ROSE Closest SLC38A3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GNAI2 ; SEMA3B ; HYAL3 ; MIR6872 ; LSMEM2 ; GNAT1 ; MIR566 ; SEMA3B-AS1 ; SLC38A3 ; SEMA3F ; MIR5787 ; NAT6 ; IFRD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_049401160 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers