SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_049401034
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Islets
Biosample name: differentiated hESCs Late pancreatic progenitor cells
Genomic region: chr7:27096153-27100497
Size: 4344
Super-enhancer rank 1034
Number of SE elements: 1
ChIP density(Case|Control): 8257.5096|830.1384
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOTAIRM1 ;
ROSE Overlap HOXA2 ; HOTAIRM1 ;
ROSE Proximal HOXA-AS3 ; HOXA5 ; HOXA-AS2 ; HOXA1 ; HOXA3 ; HOXA4 ; HOTAIRM1 ; HOXA6 ;
ROSE Closest HOTAIRM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HOXA6 ; HOTAIRM1 ; HOXA-AS3 ; HOXA10 ; HOXA-AS2 ; MIR196B ; HOXA10-HOXA9 ; HOXA11-AS ; HOXA3 ; HOXA9 ; HOXA7 ; HOXA1 ; HOXA2 ; HOXA10-AS ; HOXA5 ; HOXA11 ; HOXA4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_049401034 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers