SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_049400543
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Islets
Biosample name: differentiated hESCs Late pancreatic progenitor cells
Genomic region: chr19:49546688-49556990
Size: 10302
Super-enhancer rank 543
Number of SE elements: 5
ChIP density(Case|Control): 11779.3068|1282.599
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RCN3 ;
ROSE Overlap NOSIP ;
ROSE Proximal RCN3 ; PRR12 ; MIR150 ; FCGRT ; SNORD35B ; PRRG2 ; NOSIP ;
ROSE Closest RCN3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PIH1D1 ; RPS11 ; FLT3LG ; RPL13A ; SCAF1 ; RCN3 ; NOSIP ; SNORD35B ; SNORD35A ; RRAS ; ALDH16A1 ; PRRG2 ; SNORD34 ; SNORD32A ; PRR12 ; FCGRT ; SNORD33 ; MIR150 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_049400543 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers