SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_049200712
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pharyng
Biosample name: Detroit 562_LPS
Genomic region: chr3:12749840-12766125
Size: 16285
Super-enhancer rank 712
Number of SE elements: 6
ChIP density(Case|Control): 41722.17|1988.3985
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM40;
ROSE Overlap TMEM40;
ROSE Proximal TMEM40; CAND2;
ROSE Closest TMEM40;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_049200712 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers