SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_048700066
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: HSCe_71y_CD34+,CD38-,Lineage-
Genomic region: chr12:6531903-6537820
Size: 5917
Super-enhancer rank 66
Number of SE elements: 2
ChIP density(Case|Control): 10551.1944|730.1578
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GAPDH;
ROSE Overlap GAPDH; NCAPD2;
ROSE Proximal IFFO1; GAPDH; SCARNA11; MRPL51; NOP2; SCARNA10;
ROSE Closest GAPDH;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_048700066 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers